Last updated: 2025-08-25

Checks: 1 1

Knit directory: ChIPSeq_project/

This reproducible R Markdown analysis was created with workflowr (version 1.7.1). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


The R Markdown file has unstaged changes. To know which version of the R Markdown file created these results, you’ll want to first commit it to the Git repo. If you’re still working on the analysis, you can ignore this warning. When you’re finished, you can run wflow_publish to commit the R Markdown file and build the HTML.

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The results in this page were generated with repository version 552af3e. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated:


Ignored files:
    Ignored:    .Rhistory
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Untracked files:
    Untracked:  analysis/Peak_details_CTCF_RAD21.Rmd
    Untracked:  data/CTCF_peaks_after_dedup.csv
    Untracked:  data/CTCF_peaks_before_dedup.csv
    Untracked:  data/RAD21_peaks_after_dedup.csv
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Unstaged changes:
    Modified:   analysis/index.Rmd

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/index.Rmd) and HTML (docs/index.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd 552af3e sayanpaul01 2025-08-25 Commit
html 552af3e sayanpaul01 2025-08-25 Commit
Rmd 9db528a sayanpaul01 2025-08-25 commit
html 9db528a sayanpaul01 2025-08-25 commit
Rmd 9c77a6c sayanpaul01 2025-08-24 Commit
html 9c77a6c sayanpaul01 2025-08-24 Commit
html 4c5ce13 sayanpaul01 2025-08-19 Commit
html 841c632 sayanpaul01 2025-08-19 Commit
html 25ce453 sayanpaul01 2025-08-18 Commit
html ab9a136 sayanpaul01 2025-08-18 Commit
html abe25eb sayanpaul01 2025-08-18 Commit
html aaaed7e sayanpaul01 2025-08-17 Commit
html 90183c3 sayanpaul01 2025-08-17 Commit
html 3c1ffe7 sayanpaul01 2025-08-17 Commit
Rmd 7906757 sayanpaul01 2025-08-15 Commit
html 7906757 sayanpaul01 2025-08-15 Commit
html ae849ce sayanpaul01 2025-08-15 Commit
Rmd ffe6f24 sayanpaul01 2025-08-15 Commit
html ffe6f24 sayanpaul01 2025-08-15 Commit
html d0f4698 sayanpaul01 2025-08-15 Build site.
html 82be862 sayanpaul01 2025-08-15 Build site.
Rmd 90afe43 sayanpaul01 2025-08-15 Commit
html 90afe43 sayanpaul01 2025-08-15 Commit
html 373086f sayanpaul01 2025-08-15 Build site.
Rmd 8dbb6f9 sayanpaul01 2025-08-15 Start workflowr project.

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Cardiomyocyte Purity

QC Data

Peak Calling